Example input file - structure factor calculation.
In this example file, a molecule is read in, and then rotated and translated to the correct position for structure factor calculation.
! ! Input file name: como4.inp ! title Structure factor calculation for four 3eca monomers ! print como4.prt polar xzk euler zyz ortho axabz ! crystal cell 76.700 96.100 111.300 90.00 97.10 90.00 P 21 8 3ECA 310 fobs 3eca.cal format 3i4, f8.2, 8x, f8.2 frejection 1.0 1.0 0. resolution 20 3.5 symm p21 end ! model bover 25 ! assign overall B value input 3ecam.pdb ! read in PDB file center ! center model at 0 0 0 ! duplicate 1 2 ! duplicate molecule duplicate 1 3 ! duplicate molecule duplicate 1 4 ! duplicate molecule ! rotate 257.750 26.000 264.875 euler ! rotate molecule translate 0.3281 0.0000 0.1146 df ! translate molecule add 1000 ! add 1000 to residue number flag t ! assign flag, known orientation and position swap 1 2 ! swap molecule information ! rotate 251.812 32.000 259.562 e ! rotate new molecule translate 0.8750 0.5000 0.6198 df ! translate molecule flag t ! assign flag chain c ! assign chain name C to this molecule swap 1 3 ! swap information ! rotate 36.250 71.500 320.625 e ! rotate new molecule translate 0.0312 0.7222 0.2656 df ! translate flag t ! assign flag add 3000 ! add 3000 to residue number swap 1 4 ! swap ! rotate 23.55 68.02 326.37 euler ! rotate new molecule translation 0.5114 0.2593 0.7412 df ! translate flag t ! assign flag end ! sf resolution 20 3.5 ! resolution range file como4.cal ! write Fcalc's to this file end ! stop
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